Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891214.1_cds_XP_016445953.1_40859
CDS Infomation

[gene=LOC107771138] [db_xref=GeneID:107771138] [protein=cysteine-rich receptor-like protein kinase 42] [protein_id=XP_016445953.1] [location=complement(join(29297..29695,29885..30029,30217..30451,30544..30894,31002..31121,31586..32363))] [gbkey=CDS]
Sequence

ATGCATTTTCCACCAATATACCTTGAACATGTCACGTTCATCTCCTTAATTTTCTTCATA
TTTCTGTTTTCTCCTTCTCTTTGTGATCCAAGAACTTCGGTTGCTAATATTTCTTGCAAA
CCCCGTACAAATGTGTCAATTACCAGCGATTTATTCCCAAAATACATGGAAATCATGGGA
ACTCTCAGTGATTTCATTTCGGAAAATAAGTCAGCAACATATTCCTTAAGCTCTAATTCA
CCTGATATTTATGGATTAGCGAAATGCCATAACGATCTTTCTCAGGACGAATGCAAACTC
TGTTTCGTCGAAGCTAAGGAAAAGCTCAACACGTGCATTCCTGCACCTGGTGGCTCTGTT
TATCTAGACGGTTGTTTTCTCAGATATGAAAATTATGATTTTTTCGACGAGAGCGTTCAA
AAGAATTCGTCTAGTTATGTTTGTGGTGTTCCGACAGATATAACAAATGATCAGTATATG
AAAAGGGATTTTGCAGCAAGAGTGGATCGTGCAATTGCGAATGTCACAAGCATGTCTGTA
GTAAATAAAGGATTTGGAGCGACGATTGTGAAAAGTGGGCTGCTTGCTGTTTATGCATTA
GGCCAATGTTGGGATTCATTGGACGTGGAAATATGTACTAAGTGCCTGAATAATGCTGGA
GATATGATAAGAAAATGTTTGCCTGCTGCAGAAGGAAAAGCTATGAATGCTGGTTGCTAT
TTGAGATACTCTTCTAATAAATTCTTTGGTGATGGAGCACTAGTCCTGGCTGATAAAGGA
CCAACGAAGCGTAAGAATATATGGATAATTGCAGCGATTGTATTATTGACTATCTTGGGA
ATATTTGCTATTTTAGGAGCTTTTTTAGGCTATAGAAGATATTCTACGGAGCAAGGAGGT
ACCAAGAGGGTTCATAAGATTCCACGGGCTCTTGAGACATCGAAACTAAATTTCAAATAT
GAAATGTTAGAAAAAGCAACAGGTGGTTTTGATCCGTTAAACAAGTTAGGCCAAGGAGGA
TCAGGTTCAGTATATAAAGGAATTCTTCCTGATGGAAAAACTGTTGCTGTAAAAAGATTA
TTGTACAATACGCGCCAATGGGCAGAGGAATTCTTTAACGAGGTCAATTTGATCAGTGGT
ATTCAACACAAGAATGTTGTGAAACTCTTGGGTTGTAGCATAGAAGGACCAGAGAGTCTT
CTGGTTTTTGATTTTGTATCTAACAAGAACCTTGATCAAGTGCTTTTTGATAAGAATAAG
CGACAATTTGTGAGCTGGAATGAGAGGTTTCAAATCATATTGGGAATAGCAGAAGGGCTC
GCATATCTGCATGAAGGAAGCAAAGCAAAGATAATCCACAGAGATATTAAGAACAGTAAT
ATTTTGGTTGATGAACAACTCATCCCAAAAATTGCTGATTTTGGACTTGCTCGACGTTTT
GCTCCCCATAAAACTCATGTCAGCACTGGAGTTGCAGGAACCTTGGGATACCTAGCTCCT
GAATATCTTCTTCAAGGATGTTTAACAGAGAAAGCAGATGTTTATTCCTTCGGAGTGGTG
GCTATAGAGGTTGCGTGTTGTATAAAGAACAATGTCTTTGTGAGTGATTCCAGATCAGTC
CTACAAACTGTGTGGAGAAATTACAAGTTGAATAAGATTACTGAGTCCATCGACAGCAGG
CTGATGAGTGATTTTCAAGAACAGGAGGCGTCACGCGTGCTTCAACTAGGGTTATTGTGT
ACGCAAACCAGAAGATTTTCGCGACCATCTATGTCTCAAGTGGTAAAAATTCTAAGAAAC
AAAGAAACTGAAGTTCCTGTGCCTATGCAACCGCCATTCCAGAACTCAAGTTTACTAGCC
CCTCCAGATACAACAAGTAGGTCTTCCGTGACTAAAGATAGTTTGTGCTCAGAATGGTAT
TCTACGGATGGAATGTCTATTCATTCTTCTGAGTTTGCTAGCCTATCTAGCTCTCAATCA
AGTGATTTTTCGACGAGTGAAAGCAGTAGACTTCTGAAAATAGCTTGA

Peptide Sequence

PEP ID

XP_016445953.1
PEP Infomation

PREDICTED: cysteine-rich receptor-like protein kinase 42 [Nicotiana tabacum]
Sequence

MHFPPIYLEHVTFISLIFFIFLFSPSLCDPRTSVANISCKPRTNVSITSDLFPKYMEIMG
TLSDFISENKSATYSLSSNSPDIYGLAKCHNDLSQDECKLCFVEAKEKLNTCIPAPGGSV
YLDGCFLRYENYDFFDESVQKNSSSYVCGVPTDITNDQYMKRDFAARVDRAIANVTSMSV
VNKGFGATIVKSGLLAVYALGQCWDSLDVEICTKCLNNAGDMIRKCLPAAEGKAMNAGCY
LRYSSNKFFGDGALVLADKGPTKRKNIWIIAAIVLLTILGIFAILGAFLGYRRYSTEQGG
TKRVHKIPRALETSKLNFKYEMLEKATGGFDPLNKLGQGGSGSVYKGILPDGKTVAVKRL
LYNTRQWAEEFFNEVNLISGIQHKNVVKLLGCSIEGPESLLVFDFVSNKNLDQVLFDKNK
RQFVSWNERFQIILGIAEGLAYLHEGSKAKIIHRDIKNSNILVDEQLIPKIADFGLARRF
APHKTHVSTGVAGTLGYLAPEYLLQGCLTEKADVYSFGVVAIEVACCIKNNVFVSDSRSV
LQTVWRNYKLNKITESIDSRLMSDFQEQEASRVLQLGLLCTQTRRFSRPSMSQVVKILRN
KETEVPVPMQPPFQNSSLLAPPDTTSRSSVTKDSLCSEWYSTDGMSIHSSEFASLSSSQS
SDFSTSESSRLLKIA

Transcript Sequence

Gene sequence data has not been registered.